| Differences from rCRS | Prevalence | Location | Codon | Amino Change | Haplogroup Indication (§) | |
|---|---|---|---|---|---|---|
| Position | Difference | |||||
| 73 | A → G | 0.84 | D-loop (HV2) | HV | ||
| 263 | A → G | 0.99 | D-loop (HV2) | |||
| 309 | inserted C | 0.5 | D-loop (HV2) | |||
| 315 | inserted C | 0.85 | D-loop (HV2) | |||
| 522 | deletion | D-loop (HV3) | ||||
| 523 | deletion | D-loop (HV3) | ||||
| 750 | A → G | 0.99 | 12S rRNA | |||
| 1438 | A → G | 0.97 | 12S rRNA | |||
| 3992 | C → T | 0.01 | ND1 | 229 | Thr → Met | H4 |
| 4024 | A → G | 0.008 | ND1 | 240 | Thr → Ala | H4a |
| 4769 | A → G | 0.99 | ND2 | 100 | silent: Met | |
| 5004 | T → C | 0.01 | ND2 | 179 | silent: Leu | H4 |
| 8269 | G → A | 0.01 | Cox2 | 228 | silent: STP | H4a1 |
| 8860 | A → G | 1.0 | ATPase6 | 112 | Thr → Ala | |
| 9123 | G → A | 0.04 | ATPase6 | 199 | silent: Leu | H4 |
| 10007 | T → C | 0.00016 | tRNA Gly | H4a1a1 | ||
| 10034 | T → C | 0.01 | tRNA Gly | H4a1a1 | ||
| 10044 | A → G | 0.006 | tRNA Gly | H4a1a | ||
| 14365 | C → T | 0.01 | ND6 | 103 | silent: Val | H4a |
| 14582 | A → G | 0.01 | ND6 | 31 | Val → Ala | H4a |
| 15326 | A → G | 0.99 | Cytb | 194 | Thr → Ala | |
§ Subclades of haplogroup H are given according to the scheme used by Roostalu (2006)
H4a1a1 is a provisional new subclade, based on the fact that I share two mutations in one of the samples included in a phylogenetic tree at MitoMap. This is an informal designation and subject to change.
Mitosearch ID: QPZZS
GenBank ID: EU200347
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| © Alan M Stanier (contact details) |